Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RB1P06400 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RB1P06400 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RB1P06400 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RB1P06400 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 U82695.1-201ENST00000635752 1889 ntBASIC17.14■□□□□ 0.33
RB1P06400 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RB1P06400 AL645728.1-201ENST00000366221 2101 ntBASIC17.14■□□□□ 0.33
RB1P06400 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RB1P06400 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.14■□□□□ 0.33
RB1P06400 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.14■□□□□ 0.33
RB1P06400 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RB1P06400 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.14■□□□□ 0.33
RB1P06400 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.14■□□□□ 0.33
RB1P06400 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.14■□□□□ 0.33
RB1P06400 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RB1P06400 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RB1P06400 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.14■□□□□ 0.33
RB1P06400 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.14■□□□□ 0.33
RB1P06400 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RB1P06400 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.14■□□□□ 0.33
RB1P06400 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
RB1P06400 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.14■□□□□ 0.33
RB1P06400 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.14■□□□□ 0.33
RB1P06400 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.14■□□□□ 0.33
RB1P06400 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.14■□□□□ 0.33
RB1P06400 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RB1P06400 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 AC067852.2-201ENST00000590513 2313 ntBASIC17.14■□□□□ 0.33
RB1P06400 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RB1P06400 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.14■□□□□ 0.33
RB1P06400 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.13■□□□□ 0.33
RB1P06400 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RB1P06400 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.13■□□□□ 0.33
RB1P06400 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.13■□□□□ 0.33
RB1P06400 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.13■□□□□ 0.33
RB1P06400 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 AC092933.1-201ENST00000393644 945 ntBASIC17.13■□□□□ 0.33
RB1P06400 BRWD1P1-201ENST00000401091 371 ntBASIC17.13■□□□□ 0.33
RB1P06400 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RB1P06400 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.13■□□□□ 0.33
RB1P06400 CSF2RBP1-201ENST00000447905 391 ntBASIC17.13■□□□□ 0.33
RB1P06400 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.13■□□□□ 0.33
RB1P06400 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.13■□□□□ 0.33
RB1P06400 TDH-203ENST00000531764 1110 ntBASIC17.13■□□□□ 0.33
RB1P06400 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.13■□□□□ 0.33
RB1P06400 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.13■□□□□ 0.33
RB1P06400 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.13■□□□□ 0.33
RB1P06400 GPR182-203ENST00000622922 591 ntBASIC17.13■□□□□ 0.33
RB1P06400 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RB1P06400 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RB1P06400 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.13■□□□□ 0.33
RB1P06400 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 AC020907.1-201ENST00000616460 1350 ntBASIC17.13■□□□□ 0.33
RB1P06400 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.13■□□□□ 0.33
RB1P06400 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RB1P06400 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
RB1P06400 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RB1P06400 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.12■□□□□ 0.33
RB1P06400 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
RB1P06400 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RB1P06400 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RB1P06400 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.12■□□□□ 0.33
RB1P06400 AC005229.1-201ENST00000392885 409 ntBASIC17.12■□□□□ 0.33
RB1P06400 AC099336.1-201ENST00000417053 1171 ntBASIC17.12■□□□□ 0.33
RB1P06400 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.12■□□□□ 0.33
RB1P06400 FAM21FP-201ENST00000426241 1131 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms