Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.43■□□□□ 0.38
TIMP1P01033 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TIMP1P01033 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TIMP1P01033 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.43■□□□□ 0.38
TIMP1P01033 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 AL022328.3-201ENST00000607943 679 ntBASIC17.43■□□□□ 0.38
TIMP1P01033 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.43■□□□□ 0.38
TIMP1P01033 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.43■□□□□ 0.38
TIMP1P01033 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TIMP1P01033 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TIMP1P01033 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.43■□□□□ 0.38
TIMP1P01033 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TIMP1P01033 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TIMP1P01033 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.42■□□□□ 0.38
TIMP1P01033 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.42■□□□□ 0.38
TIMP1P01033 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TIMP1P01033 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TIMP1P01033 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 MIR326-201ENST00000362220 95 ntBASIC17.42■□□□□ 0.38
TIMP1P01033 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TIMP1P01033 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.42■□□□□ 0.38
TIMP1P01033 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.42■□□□□ 0.38
TIMP1P01033 FAM86HP-204ENST00000513466 959 ntBASIC17.42■□□□□ 0.38
TIMP1P01033 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.42■□□□□ 0.38
TIMP1P01033 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.42■□□□□ 0.38
TIMP1P01033 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.42■□□□□ 0.38
TIMP1P01033 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.42■□□□□ 0.38
TIMP1P01033 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.42■□□□□ 0.38
TIMP1P01033 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.42■□□□□ 0.38
TIMP1P01033 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.42■□□□□ 0.38
TIMP1P01033 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.42■□□□□ 0.38
TIMP1P01033 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.42■□□□□ 0.38
TIMP1P01033 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TIMP1P01033 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 AL390961.4-201ENST00000623958 2535 ntBASIC17.42■□□□□ 0.38
TIMP1P01033 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMP1P01033 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TIMP1P01033 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.41■□□□□ 0.38
TIMP1P01033 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.41■□□□□ 0.38
TIMP1P01033 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.41■□□□□ 0.38
TIMP1P01033 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TIMP1P01033 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 VDAC1P7-201ENST00000462417 847 ntBASIC17.41■□□□□ 0.38
TIMP1P01033 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.41■□□□□ 0.38
TIMP1P01033 AC243562.2-201ENST00000561247 970 ntBASIC17.41■□□□□ 0.38
TIMP1P01033 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.41■□□□□ 0.38
TIMP1P01033 AC005252.2-201ENST00000624630 1141 ntBASIC17.41■□□□□ 0.38
TIMP1P01033 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.41■□□□□ 0.38
TIMP1P01033 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TIMP1P01033 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.41■□□□□ 0.38
TIMP1P01033 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMP1P01033 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TIMP1P01033 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TIMP1P01033 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms