Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFPL1O75677 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.44■□□□□ 0.22
RFPL1O75677 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RFPL1O75677 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.44■□□□□ 0.22
RFPL1O75677 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.44■□□□□ 0.22
RFPL1O75677 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RFPL1O75677 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.44■□□□□ 0.22
RFPL1O75677 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.44■□□□□ 0.22
RFPL1O75677 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.44■□□□□ 0.22
RFPL1O75677 MTDHP5-201ENST00000598980 586 ntBASIC16.44■□□□□ 0.22
RFPL1O75677 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.44■□□□□ 0.22
RFPL1O75677 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.44■□□□□ 0.22
RFPL1O75677 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFPL1O75677 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RFPL1O75677 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.44■□□□□ 0.22
RFPL1O75677 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RFPL1O75677 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFPL1O75677 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.44■□□□□ 0.22
RFPL1O75677 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.43■□□□□ 0.22
RFPL1O75677 AC005622.1-201ENST00000636801 1703 ntBASIC16.43■□□□□ 0.22
RFPL1O75677 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 AL513477.1-201ENST00000602865 2407 ntBASIC16.43■□□□□ 0.22
RFPL1O75677 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.43■□□□□ 0.22
RFPL1O75677 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 HCG4-201ENST00000418983 998 ntBASIC16.43■□□□□ 0.22
RFPL1O75677 HMGN1P19-201ENST00000436976 333 ntBASIC16.43■□□□□ 0.22
RFPL1O75677 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.43■□□□□ 0.22
RFPL1O75677 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.43■□□□□ 0.22
RFPL1O75677 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
RFPL1O75677 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RFPL1O75677 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
RFPL1O75677 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 AC023824.1-201ENST00000562945 2975 ntBASIC16.43■□□□□ 0.22
RFPL1O75677 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFPL1O75677 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFPL1O75677 AC129492.6-201ENST00000611383 1305 ntBASIC16.43■□□□□ 0.22
RFPL1O75677 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.43■□□□□ 0.22
RFPL1O75677 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.43■□□□□ 0.22
RFPL1O75677 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFPL1O75677 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.42■□□□□ 0.22
RFPL1O75677 AC023274.1-201ENST00000418278 595 ntBASIC16.42■□□□□ 0.22
RFPL1O75677 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.42■□□□□ 0.22
RFPL1O75677 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.42■□□□□ 0.22
RFPL1O75677 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.42■□□□□ 0.22
RFPL1O75677 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.42■□□□□ 0.22
RFPL1O75677 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.42■□□□□ 0.22
RFPL1O75677 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.42■□□□□ 0.22
RFPL1O75677 AC064836.3-201ENST00000607928 673 ntBASIC16.42■□□□□ 0.22
RFPL1O75677 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFPL1O75677 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms