Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRCH4O75427 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LRCH4O75427 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LRCH4O75427 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 YBX2P1-201ENST00000394192 760 ntBASIC16.99■□□□□ 0.31
LRCH4O75427 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH4O75427 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH4O75427 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.99■□□□□ 0.31
LRCH4O75427 AC023511.2-201ENST00000618803 211 ntBASIC16.99■□□□□ 0.31
LRCH4O75427 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH4O75427 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH4O75427 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LRCH4O75427 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.99■□□□□ 0.31
LRCH4O75427 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH4O75427 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH4O75427 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
LRCH4O75427 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH4O75427 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH4O75427 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH4O75427 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH4O75427 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRCH4O75427 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.98■□□□□ 0.31
LRCH4O75427 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
LRCH4O75427 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LRCH4O75427 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 AC245100.5-201ENST00000452108 331 ntBASIC16.98■□□□□ 0.31
LRCH4O75427 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
LRCH4O75427 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.98■□□□□ 0.31
LRCH4O75427 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.98■□□□□ 0.31
LRCH4O75427 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.98■□□□□ 0.31
LRCH4O75427 C20orf181-201ENST00000623918 480 ntBASIC16.98■□□□□ 0.31
LRCH4O75427 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRCH4O75427 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.98■□□□□ 0.31
LRCH4O75427 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.97■□□□□ 0.31
LRCH4O75427 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.97■□□□□ 0.31
LRCH4O75427 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LRCH4O75427 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.97■□□□□ 0.31
LRCH4O75427 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.97■□□□□ 0.31
LRCH4O75427 ALG1L5P-201ENST00000482043 771 ntBASIC16.97■□□□□ 0.31
LRCH4O75427 AC105233.2-201ENST00000523697 349 ntBASIC16.97■□□□□ 0.31
LRCH4O75427 FAM86C2P-203ENST00000528684 1004 ntBASIC16.97■□□□□ 0.31
LRCH4O75427 AF228730.5-201ENST00000530288 346 ntBASIC16.97■□□□□ 0.31
LRCH4O75427 AC243562.1-201ENST00000560672 389 ntBASIC16.97■□□□□ 0.31
LRCH4O75427 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.97■□□□□ 0.31
LRCH4O75427 AC027307.2-201ENST00000591252 911 ntBASIC16.97■□□□□ 0.31
LRCH4O75427 MIR4321-201ENST00000592276 80 ntBASIC16.97■□□□□ 0.31
LRCH4O75427 AC008267.7-201ENST00000624570 1194 ntBASIC16.97■□□□□ 0.31
LRCH4O75427 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRCH4O75427 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRCH4O75427 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.97■□□□□ 0.31
LRCH4O75427 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.97■□□□□ 0.31
LRCH4O75427 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.97■□□□□ 0.31
LRCH4O75427 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRCH4O75427 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRCH4O75427 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
LRCH4O75427 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.97■□□□□ 0.31
LRCH4O75427 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms