Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.66■□□□□ 0.1
GFRA3O60609 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
GFRA3O60609 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GFRA3O60609 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GFRA3O60609 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.66■□□□□ 0.1
GFRA3O60609 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 NKAIN1P1-201ENST00000435754 582 ntBASIC15.66■□□□□ 0.1
GFRA3O60609 AC093724.1-201ENST00000448659 1027 ntBASIC15.66■□□□□ 0.1
GFRA3O60609 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.66■□□□□ 0.1
GFRA3O60609 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 AC022137.2-201ENST00000503482 481 ntBASIC15.66■□□□□ 0.1
GFRA3O60609 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 AC044849.1-201ENST00000519737 1188 ntBASIC15.66■□□□□ 0.1
GFRA3O60609 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.66■□□□□ 0.1
GFRA3O60609 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 AP001065.2-201ENST00000617205 644 ntBASIC15.66■□□□□ 0.1
GFRA3O60609 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
GFRA3O60609 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GFRA3O60609 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
GFRA3O60609 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA3O60609 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GFRA3O60609 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
GFRA3O60609 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.66■□□□□ 0.1
GFRA3O60609 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GFRA3O60609 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
GFRA3O60609 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
GFRA3O60609 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.65■□□□□ 0.1
GFRA3O60609 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.65■□□□□ 0.1
GFRA3O60609 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.65■□□□□ 0.1
GFRA3O60609 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 KATNBL1P2-201ENST00000433311 835 ntBASIC15.65■□□□□ 0.1
GFRA3O60609 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 AC234782.1-201ENST00000451950 919 ntBASIC15.65■□□□□ 0.1
GFRA3O60609 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.65■□□□□ 0.1
GFRA3O60609 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.65■□□□□ 0.1
GFRA3O60609 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
GFRA3O60609 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.65■□□□□ 0.1
GFRA3O60609 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.65■□□□□ 0.1
GFRA3O60609 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.65■□□□□ 0.1
GFRA3O60609 AL139011.1-202ENST00000642063 584 ntBASIC15.65■□□□□ 0.1
GFRA3O60609 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
GFRA3O60609 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
GFRA3O60609 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA3O60609 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA3O60609 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
GFRA3O60609 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 AC097065.1-201ENST00000425737 517 ntBASIC15.64■□□□□ 0.09
GFRA3O60609 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.64■□□□□ 0.09
GFRA3O60609 FAU-202ENST00000434372 533 ntTSL 2 BASIC15.64■□□□□ 0.09
GFRA3O60609 NOC2LP1-201ENST00000450578 752 ntBASIC15.64■□□□□ 0.09
GFRA3O60609 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.64■□□□□ 0.09
GFRA3O60609 RN7SL181P-201ENST00000462921 277 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms