Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.66■□□□□ 0.1
PRICKLE3O43900 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 AL645939.2-201ENST00000427340 991 ntBASIC15.66■□□□□ 0.1
PRICKLE3O43900 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 AC051619.7-201ENST00000568314 623 ntBASIC15.66■□□□□ 0.1
PRICKLE3O43900 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 MIR4453-201ENST00000584019 89 ntBASIC15.66■□□□□ 0.1
PRICKLE3O43900 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 AC007967.4-201ENST00000614700 386 ntBASIC15.66■□□□□ 0.1
PRICKLE3O43900 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PRICKLE3O43900 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRICKLE3O43900 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 PCDHB19P-201ENST00000570871 2371 ntBASIC15.65■□□□□ 0.1
PRICKLE3O43900 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.65■□□□□ 0.1
PRICKLE3O43900 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRICKLE3O43900 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.1
PRICKLE3O43900 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRICKLE3O43900 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRICKLE3O43900 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRICKLE3O43900 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRICKLE3O43900 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRICKLE3O43900 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRICKLE3O43900 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRICKLE3O43900 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRICKLE3O43900 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRICKLE3O43900 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRICKLE3O43900 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRICKLE3O43900 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRICKLE3O43900 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRICKLE3O43900 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms