Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PFDN6O15212 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 BCAR1-209ENST00000546196 1340 ntBASIC16.44■□□□□ 0.22
PFDN6O15212 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.43■□□□□ 0.22
PFDN6O15212 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PFDN6O15212 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.43■□□□□ 0.22
PFDN6O15212 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 AL009183.1-201ENST00000603760 355 ntBASIC16.43■□□□□ 0.22
PFDN6O15212 BX640515.1-201ENST00000617215 977 ntBASIC16.43■□□□□ 0.22
PFDN6O15212 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.43■□□□□ 0.22
PFDN6O15212 AL161645.1-201ENST00000622716 1255 ntBASIC16.43■□□□□ 0.22
PFDN6O15212 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.43■□□□□ 0.22
PFDN6O15212 AL662844.4-201ENST00000606367 2838 ntBASIC16.43■□□□□ 0.22
PFDN6O15212 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 AC006449.6-201ENST00000612330 2296 ntBASIC16.43■□□□□ 0.22
PFDN6O15212 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN6O15212 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.43■□□□□ 0.22
PFDN6O15212 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.43■□□□□ 0.22
PFDN6O15212 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN6O15212 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.42■□□□□ 0.22
PFDN6O15212 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.42■□□□□ 0.22
PFDN6O15212 LINC00554-201ENST00000564841 3011 ntBASIC16.42■□□□□ 0.22
PFDN6O15212 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 AC140658.5-201ENST00000438532 169 ntBASIC16.42■□□□□ 0.22
PFDN6O15212 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 FDX1P1-201ENST00000449115 551 ntBASIC16.42■□□□□ 0.22
PFDN6O15212 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.42■□□□□ 0.22
PFDN6O15212 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.42■□□□□ 0.22
PFDN6O15212 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PFDN6O15212 AC004877.2-201ENST00000623941 599 ntBASIC16.42■□□□□ 0.22
PFDN6O15212 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.42■□□□□ 0.22
PFDN6O15212 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PFDN6O15212 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PFDN6O15212 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PFDN6O15212 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PFDN6O15212 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PFDN6O15212 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.42■□□□□ 0.22
PFDN6O15212 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN6O15212 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN6O15212 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN6O15212 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PFDN6O15212 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PFDN6O15212 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.41■□□□□ 0.22
PFDN6O15212 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN6O15212 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.41■□□□□ 0.22
PFDN6O15212 PCDHA1-201ENST00000378133 2726 ntBASIC16.41■□□□□ 0.22
PFDN6O15212 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN6O15212 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN6O15212 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.41■□□□□ 0.22
PFDN6O15212 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms