Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3EO15041 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SEMA3EO15041 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3EO15041 DOC2GP-202ENST00000514950 1163 ntBASIC19.54■□□□□ 0.72
SEMA3EO15041 AP005018.1-201ENST00000525475 301 ntBASIC19.54■□□□□ 0.72
SEMA3EO15041 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.54■□□□□ 0.72
SEMA3EO15041 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3EO15041 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3EO15041 AC025048.3-201ENST00000590609 569 ntBASIC19.54■□□□□ 0.72
SEMA3EO15041 AC005702.4-201ENST00000618393 416 ntBASIC19.54■□□□□ 0.72
SEMA3EO15041 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 FLJ38576-201ENST00000623820 2459 ntBASIC19.54■□□□□ 0.72
SEMA3EO15041 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3EO15041 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SEMA3EO15041 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3EO15041 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SEMA3EO15041 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
SEMA3EO15041 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SEMA3EO15041 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SEMA3EO15041 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.54■□□□□ 0.72
SEMA3EO15041 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA3EO15041 AC007541.1-201ENST00000570282 1469 ntBASIC19.54■□□□□ 0.72
SEMA3EO15041 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA3EO15041 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.53■□□□□ 0.72
SEMA3EO15041 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SEMA3EO15041 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SEMA3EO15041 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SEMA3EO15041 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3EO15041 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.53■□□□□ 0.72
SEMA3EO15041 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3EO15041 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.53■□□□□ 0.72
SEMA3EO15041 API5-211ENST00000534695 560 ntTSL 5 BASIC19.53■□□□□ 0.72
SEMA3EO15041 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.53■□□□□ 0.72
SEMA3EO15041 TP53TG3HP-202ENST00000569755 579 ntBASIC19.53■□□□□ 0.72
SEMA3EO15041 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3EO15041 SRD5A3P1-201ENST00000603021 949 ntBASIC19.53■□□□□ 0.72
SEMA3EO15041 AC074044.1-201ENST00000609673 707 ntBASIC19.53■□□□□ 0.72
SEMA3EO15041 AC004461.2-201ENST00000629517 803 ntBASIC19.53■□□□□ 0.72
SEMA3EO15041 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SEMA3EO15041 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.53■□□□□ 0.72
SEMA3EO15041 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3EO15041 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SEMA3EO15041 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA3EO15041 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA3EO15041 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SEMA3EO15041 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SEMA3EO15041 AC063926.2-201ENST00000623766 1308 ntBASIC19.52■□□□□ 0.72
SEMA3EO15041 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.52■□□□□ 0.72
SEMA3EO15041 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3EO15041 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SEMA3EO15041 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SEMA3EO15041 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SEMA3EO15041 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SEMA3EO15041 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.52■□□□□ 0.72
SEMA3EO15041 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3EO15041 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3EO15041 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
SEMA3EO15041 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.52■□□□□ 0.72
SEMA3EO15041 GAPDHP21-201ENST00000450301 1010 ntBASIC19.52■□□□□ 0.72
SEMA3EO15041 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.52■□□□□ 0.72
SEMA3EO15041 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SEMA3EO15041 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.52■□□□□ 0.72
SEMA3EO15041 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.52■□□□□ 0.72
SEMA3EO15041 SPDYE18-201ENST00000510091 1050 ntBASIC19.52■□□□□ 0.72
SEMA3EO15041 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SEMA3EO15041 AC092337.1-201ENST00000568699 1129 ntBASIC19.52■□□□□ 0.72
SEMA3EO15041 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.52■□□□□ 0.72
SEMA3EO15041 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.52■□□□□ 0.72
SEMA3EO15041 AC004790.1-201ENST00000612686 536 ntBASIC19.52■□□□□ 0.72
SEMA3EO15041 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.52■□□□□ 0.72
SEMA3EO15041 AL109936.8-201ENST00000641772 604 ntBASIC19.52■□□□□ 0.72
SEMA3EO15041 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms