Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.36■□□□□ 0.53
DDX39AO00148 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.36■□□□□ 0.53
DDX39AO00148 AC092580.3-201ENST00000430932 139 ntBASIC18.36■□□□□ 0.53
DDX39AO00148 BCRP1-201ENST00000444246 691 ntBASIC18.36■□□□□ 0.53
DDX39AO00148 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX39AO00148 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.36■□□□□ 0.53
DDX39AO00148 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX39AO00148 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX39AO00148 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX39AO00148 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
DDX39AO00148 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DDX39AO00148 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX39AO00148 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX39AO00148 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX39AO00148 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX39AO00148 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX39AO00148 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
DDX39AO00148 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX39AO00148 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.35■□□□□ 0.53
DDX39AO00148 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX39AO00148 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX39AO00148 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.35■□□□□ 0.53
DDX39AO00148 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX39AO00148 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 BANF1P1-201ENST00000553684 263 ntBASIC18.35■□□□□ 0.53
DDX39AO00148 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX39AO00148 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.35■□□□□ 0.53
DDX39AO00148 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.35■□□□□ 0.53
DDX39AO00148 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.35■□□□□ 0.53
DDX39AO00148 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX39AO00148 AC092364.2-201ENST00000596710 2692 ntBASIC18.35■□□□□ 0.53
DDX39AO00148 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
DDX39AO00148 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.34■□□□□ 0.53
DDX39AO00148 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
DDX39AO00148 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX39AO00148 AC027369.6-201ENST00000525520 931 ntBASIC18.34■□□□□ 0.53
DDX39AO00148 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.34■□□□□ 0.53
DDX39AO00148 AC105021.1-202ENST00000570572 669 ntBASIC18.34■□□□□ 0.53
DDX39AO00148 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.34■□□□□ 0.53
DDX39AO00148 AL158211.3-201ENST00000607385 239 ntBASIC18.34■□□□□ 0.53
DDX39AO00148 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
DDX39AO00148 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
DDX39AO00148 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX39AO00148 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX39AO00148 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
DDX39AO00148 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DDX39AO00148 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms