Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHISA3A0PJX4 KRT18P1-202ENST00000452408 1331 ntBASIC14.27□□□□□ -0.12
SHISA3A0PJX4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 AL049597.2-201ENST00000565575 961 ntBASIC14.27□□□□□ -0.13
SHISA3A0PJX4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 CICP4-201ENST00000447359 2812 ntBASIC14.27□□□□□ -0.13
SHISA3A0PJX4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.27□□□□□ -0.13
SHISA3A0PJX4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 AC009090.5-201ENST00000624886 2285 ntBASIC14.26□□□□□ -0.13
SHISA3A0PJX4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 AL353732.1-201ENST00000569618 1459 ntBASIC14.26□□□□□ -0.13
SHISA3A0PJX4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 AC092127.1-201ENST00000567093 3455 ntBASIC14.26□□□□□ -0.13
SHISA3A0PJX4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 LINC01238-205ENST00000567549 1107 ntBASIC14.26□□□□□ -0.13
SHISA3A0PJX4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 AC139749.1-202ENST00000617529 3139 ntBASIC14.26□□□□□ -0.13
SHISA3A0PJX4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.26□□□□□ -0.13
SHISA3A0PJX4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 LINC01101-201ENST00000622953 1884 ntBASIC14.25□□□□□ -0.13
SHISA3A0PJX4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHISA3A0PJX4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms