Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 DUX4L45-201ENST00000566406 1057 ntBASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCH2Q9Y6C5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 Z97205.2-201ENST00000564697 1639 ntBASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 AC016694.1-201ENST00000434179 700 ntBASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 FAM86LP-201ENST00000478302 853 ntBASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 ENPP7P5-201ENST00000541031 1031 ntBASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCH2Q9Y6C5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 AL136982.4-201ENST00000437689 1740 ntBASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 ACTG1P17-201ENST00000558391 1119 ntBASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 AC124283.3-201ENST00000570869 594 ntBASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 RHOXF1P1-202ENST00000635473 501 ntBASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 CYP4F24P-201ENST00000586049 1580 ntBASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCH2Q9Y6C5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms