Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 CRYGEP-201ENST00000412192 528 ntBASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 HCG4B-203ENST00000450128 991 ntBASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 UNC93B6-202ENST00000528242 690 ntBASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 AP002469.2-201ENST00000531724 424 ntBASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 AC109635.5-201ENST00000533593 962 ntBASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 RN7SL510P-201ENST00000581311 263 ntBASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 AC104692.2-201ENST00000603054 253 ntBASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 AC116407.3-201ENST00000623905 1129 ntBASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA3Q9Y5H8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 MST1L-201ENST00000442552 2185 ntBASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHA3Q9Y5H8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 AC092474.2-201ENST00000424288 719 ntBASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 RHOQP3-201ENST00000437982 621 ntBASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 AC096734.2-201ENST00000562054 433 ntBASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 AL009183.1-201ENST00000603760 355 ntBASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 AL031008.1-201ENST00000619963 541 ntBASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDHA3Q9Y5H8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA3Q9Y5H8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms