Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
POLR1DQ9Y2S0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 GPAA1P2-202ENST00000606848 1787 ntBASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 AL160237.2-201ENST00000556165 472 ntBASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 AP001005.1-201ENST00000571755 1248 ntBASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 GGT4P-201ENST00000623672 1708 ntBASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.68□□□□□ -0.06
POLR1DQ9Y2S0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR1DQ9Y2S0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms