Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 AC016694.1-201ENST00000434179 700 ntBASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 HIST3H2BA-201ENST00000436555 524 ntBASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 FTH1P14-201ENST00000482930 551 ntBASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 KRT90P-201ENST00000549264 1064 ntBASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 AC009486.1-201ENST00000569860 813 ntBASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 KRT8P39-201ENST00000396270 1433 ntBASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H4Q9UPT8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 TUBB8P12-201ENST00000308911 1335 ntBASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 TUBB7P-202ENST00000428444 1305 ntBASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 TUBB8P7-204ENST00000567960 1332 ntBASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 MPRIPP1-201ENST00000452433 1089 ntBASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 AC080080.1-201ENST00000625121 2420 ntBASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H4Q9UPT8 AC006277.1-201ENST00000624348 1610 ntBASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 TNRC18P3-201ENST00000441896 2691 ntBASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 AL645608.8-201ENST00000606034 2086 ntBASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 AL359711.2-201ENST00000563105 872 ntBASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 AC124283.3-201ENST00000570869 594 ntBASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H4Q9UPT8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.58■□□□□ 0.72
ZC3H4Q9UPT8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZC3H4Q9UPT8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.58■□□□□ 0.72
ZC3H4Q9UPT8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms