Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.36■□□□□ 0.53
COL20A1Q9P218 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL20A1Q9P218 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.36■□□□□ 0.53
COL20A1Q9P218 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL20A1Q9P218 AL035252.4-201ENST00000624174 288 ntBASIC18.36■□□□□ 0.53
COL20A1Q9P218 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL20A1Q9P218 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
COL20A1Q9P218 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL20A1Q9P218 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 AC007541.1-201ENST00000570282 1469 ntBASIC18.35■□□□□ 0.53
COL20A1Q9P218 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL20A1Q9P218 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.35■□□□□ 0.53
COL20A1Q9P218 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 SPDYE19P-201ENST00000338590 713 ntBASIC18.34■□□□□ 0.53
COL20A1Q9P218 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 AC005034.1-201ENST00000426657 489 ntBASIC18.34■□□□□ 0.53
COL20A1Q9P218 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 AC025048.3-201ENST00000590609 569 ntBASIC18.34■□□□□ 0.53
COL20A1Q9P218 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 AC005702.4-201ENST00000618393 416 ntBASIC18.34■□□□□ 0.53
COL20A1Q9P218 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL20A1Q9P218 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
COL20A1Q9P218 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
COL20A1Q9P218 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.33■□□□□ 0.53
COL20A1Q9P218 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.33■□□□□ 0.53
COL20A1Q9P218 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
COL20A1Q9P218 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL20A1Q9P218 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL20A1Q9P218 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.33■□□□□ 0.53
COL20A1Q9P218 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL20A1Q9P218 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL20A1Q9P218 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.33■□□□□ 0.53
COL20A1Q9P218 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL20A1Q9P218 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL20A1Q9P218 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 DOC2GP-202ENST00000514950 1163 ntBASIC18.33■□□□□ 0.52
COL20A1Q9P218 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 AL596325.1-201ENST00000563991 1082 ntBASIC18.33■□□□□ 0.52
COL20A1Q9P218 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.33■□□□□ 0.52
COL20A1Q9P218 SRD5A3P1-201ENST00000603021 949 ntBASIC18.33■□□□□ 0.52
COL20A1Q9P218 MIR6069-201ENST00000620069 79 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms