Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 BAATP1-201ENST00000412284 1225 ntBASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 AL355864.2-201ENST00000447420 863 ntBASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 AC103810.3-201ENST00000583567 96 ntBASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC52A1Q9NWF4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 KRT18P64-201ENST00000434946 1219 ntBASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AC012441.1-201ENST00000446669 685 ntBASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AC079316.1-201ENST00000548397 411 ntBASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AL049840.4-201ENST00000602422 811 ntBASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 AC244093.1-201ENST00000610837 814 ntBASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC52A1Q9NWF4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 C1QBPP1-201ENST00000400117 770 ntBASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 SLED1-202ENST00000512051 380 ntBASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 ZBTB45P2-201ENST00000452245 1531 ntBASIC23.03■■□□□ 1.28
SLC52A1Q9NWF4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 ZBTB12BP-201ENST00000314232 1122 ntBASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 BCYRN1-201ENST00000418539 200 ntBASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 FTH1P14-201ENST00000482930 551 ntBASIC23.02■■□□□ 1.28
SLC52A1Q9NWF4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms