Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TFAMP1-201ENST00000412727 736 ntBASIC14.03□□□□□ -0.16
GCM1Q9NP62 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 AC006538.3-201ENST00000612495 578 ntBASIC14.03□□□□□ -0.16
GCM1Q9NP62 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 AC134684.3-201ENST00000641758 218 ntBASIC14.03□□□□□ -0.16
GCM1Q9NP62 AKAP8P1-201ENST00000434743 1349 ntBASIC14.03□□□□□ -0.16
GCM1Q9NP62 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 AC016027.1-202ENST00000607927 1699 ntBASIC14.03□□□□□ -0.16
GCM1Q9NP62 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GCM1Q9NP62 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
GCM1Q9NP62 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GCM1Q9NP62 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GCM1Q9NP62 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.02□□□□□ -0.16
GCM1Q9NP62 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GCM1Q9NP62 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.02□□□□□ -0.16
GCM1Q9NP62 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GCM1Q9NP62 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GCM1Q9NP62 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GCM1Q9NP62 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.02□□□□□ -0.16
GCM1Q9NP62 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GCM1Q9NP62 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
GCM1Q9NP62 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GCM1Q9NP62 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GCM1Q9NP62 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 AC004967.1-201ENST00000453589 447 ntBASIC14.02□□□□□ -0.17
GCM1Q9NP62 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 RN7SL589P-201ENST00000481268 310 ntBASIC14.02□□□□□ -0.17
GCM1Q9NP62 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 AC026120.1-201ENST00000611536 926 ntBASIC14.02□□□□□ -0.17
GCM1Q9NP62 GPALPP1-207ENST00000611650 899 ntBASIC14.02□□□□□ -0.17
GCM1Q9NP62 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 AC011270.2-201ENST00000624293 2550 ntBASIC14.02□□□□□ -0.17
GCM1Q9NP62 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
GCM1Q9NP62 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.02□□□□□ -0.17
GCM1Q9NP62 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 GPAA1P2-202ENST00000606848 1787 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 GGT4P-201ENST00000623672 1708 ntBASIC14.01□□□□□ -0.17
GCM1Q9NP62 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GCM1Q9NP62 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.01□□□□□ -0.17
GCM1Q9NP62 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms