Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 MIR3909-201ENST00000579518 119 ntBASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 AL773604.1-201ENST00000617417 272 ntBASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 U82695.1-201ENST00000635752 1889 ntBASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 AC069224.1-201ENST00000566372 1715 ntBASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 PMS2P4-201ENST00000412466 1052 ntBASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 AL031284.1-201ENST00000419297 478 ntBASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 RN7SL510P-201ENST00000581311 263 ntBASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 AL049840.3-201ENST00000602669 611 ntBASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 MIR7706-201ENST00000613747 67 ntBASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRTM1Q9HBL6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRTM1Q9HBL6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 AP005117.1-202ENST00000581724 1908 ntBASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 AC098831.1-202ENST00000438821 336 ntBASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 VN2R19P-201ENST00000442399 1052 ntBASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms