Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 RPS20P25-201ENST00000412447 352 ntBASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 KRT18P65-201ENST00000439811 1286 ntBASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 SERBP1P5-201ENST00000510079 1181 ntBASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 BAD-207ENST00000544785 525 ntTSL 3 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC24.6■■□□□ 1.53
SCAF1Q9H7N4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 AL513523.2-202ENST00000427283 2040 ntBASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 TBC1D3P5-201ENST00000579401 1545 ntBASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 AL353708.1-201ENST00000567904 1257 ntBASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 MED16-214ENST00000617672 554 ntTSL 5 BASIC24.59■■□□□ 1.53
SCAF1Q9H7N4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
SCAF1Q9H7N4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 SEPHS1P7-201ENST00000452995 1177 ntBASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 MNT-208ENST00000575394 606 ntTSL 4 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 AL132655.2-201ENST00000596276 594 ntBASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 AD001527.2-201ENST00000622994 785 ntBASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 AC099063.4-201ENST00000641099 1602 ntBASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC24.58■■□□□ 1.52
SCAF1Q9H7N4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 CICP4-201ENST00000447359 2812 ntBASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 CYP2T1P-202ENST00000641596 2535 ntBASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 KRT18P32-201ENST00000424695 1287 ntBASIC24.57■■□□□ 1.52
SCAF1Q9H7N4 MTATP6P17-201ENST00000431030 672 ntBASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms