Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHACTR1Q9C0D0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 AKR1C7P-201ENST00000305623 895 ntBASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 PRELID1P1-202ENST00000567272 903 ntBASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 AC020658.6-201ENST00000623564 1870 ntBASIC16.63■□□□□ 0.25
PHACTR1Q9C0D0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AC011477.6-201ENST00000604980 1927 ntBASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 TMBIM7P-203ENST00000641617 1718 ntBASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AL031055.1-201ENST00000606362 631 ntBASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AC013268.4-201ENST00000637413 2228 ntBASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHACTR1Q9C0D0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms