Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TLE1-201ENST00000376463 1115 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 VDAC2P1-201ENST00000399358 958 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 RN7SKP285-201ENST00000410137 318 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 CABYR-205ENST00000415309 824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC010141.3-201ENST00000456659 717 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 RPL31P53-201ENST00000457065 348 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC009299.2-201ENST00000482477 511 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 RPL5P3-201ENST00000493817 889 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 C5orf58-202ENST00000517575 718 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 OR7K1P-201ENST00000546439 926 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC027763.1-201ENST00000572223 720 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AL050343.2-201ENST00000607338 280 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AC010338.1-201ENST00000621823 717 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 AL160413.1-201ENST00000622780 310 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 RFPL1-201ENST00000354373 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 GALM-201ENST00000272252 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
KRTAP3-3Q9BYR6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 OR2M1P-201ENST00000318104 951 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 CAPN3-204ENST00000356316 1291 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 KRTAP26-1-201ENST00000360542 1193 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 GSTA4-202ENST00000370960 859 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 MT-TH-201ENST00000387441 69 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC018630.2-202ENST00000422992 927 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms