Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 KRT18P48-201ENST00000434763 852 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC009947.2-201ENST00000444014 672 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ECEL1P2-202ENST00000465689 757 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC034232.1-201ENST00000506026 1064 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 RPPH1-201ENST00000516869 333 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC019129.2-201ENST00000609837 1235 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 REXO1L10P-201ENST00000615707 1290 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 REXO1L12P-201ENST00000622156 912 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 FAM197Y4-202ENST00000622692 608 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC073648.6-201ENST00000641589 218 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AL135999.2-201ENST00000622438 1686 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC010460.3-201ENST00000511359 1579 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms