Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 DUX4L17-201ENST00000557360 1267 ntBASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 AC005336.2-201ENST00000593183 939 ntBASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 AC139887.4-201ENST00000607877 719 ntBASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 AD001527.2-201ENST00000622994 785 ntBASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 AC026748.1-201ENST00000624349 3251 ntBASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 OR2I1P-209ENST00000641730 5365 ntBASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 VENTXP5-201ENST00000523979 775 ntBASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 AL139011.1-202ENST00000642063 584 ntBASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP4Q9BWG4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP4Q9BWG4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP4Q9BWG4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP4Q9BWG4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP4Q9BWG4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP4Q9BWG4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP4Q9BWG4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms