Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19■□□□□ 0.63
SLF1Q9BQI6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLF1Q9BQI6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19■□□□□ 0.63
SLF1Q9BQI6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19■□□□□ 0.63
SLF1Q9BQI6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19■□□□□ 0.63
SLF1Q9BQI6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 CETN4P-206ENST00000642099 2168 ntBASIC18.99■□□□□ 0.63
SLF1Q9BQI6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 AC022144.1-201ENST00000602255 1580 ntBASIC18.99■□□□□ 0.63
SLF1Q9BQI6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 AC015922.1-201ENST00000421102 1152 ntBASIC18.99■□□□□ 0.63
SLF1Q9BQI6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 SERBP1P5-201ENST00000510079 1181 ntBASIC18.99■□□□□ 0.63
SLF1Q9BQI6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 AC105021.1-202ENST00000570572 669 ntBASIC18.99■□□□□ 0.63
SLF1Q9BQI6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 AL589739.1-201ENST00000607720 493 ntBASIC18.99■□□□□ 0.63
SLF1Q9BQI6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 AC005915.1-201ENST00000624912 2018 ntBASIC18.99■□□□□ 0.63
SLF1Q9BQI6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.99■□□□□ 0.63
SLF1Q9BQI6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.99■□□□□ 0.63
SLF1Q9BQI6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 AC008894.3-201ENST00000624324 3103 ntBASIC18.98■□□□□ 0.63
SLF1Q9BQI6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 AF228730.6-201ENST00000641497 218 ntBASIC18.98■□□□□ 0.63
SLF1Q9BQI6 AC084121.3-201ENST00000641716 218 ntBASIC18.98■□□□□ 0.63
SLF1Q9BQI6 AC105233.6-201ENST00000642093 218 ntBASIC18.98■□□□□ 0.63
SLF1Q9BQI6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.98■□□□□ 0.63
SLF1Q9BQI6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.97■□□□□ 0.63
SLF1Q9BQI6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms