Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 AC080080.1-201ENST00000625121 2420 ntBASIC16.56■□□□□ 0.24
PHOX2BQ99453 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 RNU1-129P-201ENST00000384064 167 ntBASIC16.56■□□□□ 0.24
PHOX2BQ99453 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 AL353705.2-201ENST00000428243 662 ntBASIC16.56■□□□□ 0.24
PHOX2BQ99453 KRT8P13-201ENST00000463294 1010 ntBASIC16.56■□□□□ 0.24
PHOX2BQ99453 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 U1.21-201ENST00000580816 167 ntBASIC16.56■□□□□ 0.24
PHOX2BQ99453 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 AL118558.3-201ENST00000607414 1079 ntBASIC16.56■□□□□ 0.24
PHOX2BQ99453 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.56■□□□□ 0.24
PHOX2BQ99453 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHOX2BQ99453 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.56■□□□□ 0.24
PHOX2BQ99453 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 AC105233.2-201ENST00000523697 349 ntBASIC16.55■□□□□ 0.24
PHOX2BQ99453 AF228730.5-201ENST00000530288 346 ntBASIC16.55■□□□□ 0.24
PHOX2BQ99453 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 AL079307.3-201ENST00000556114 283 ntBASIC16.55■□□□□ 0.24
PHOX2BQ99453 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 AL365330.1-201ENST00000607459 531 ntBASIC16.55■□□□□ 0.24
PHOX2BQ99453 AL133215.2-201ENST00000609242 977 ntBASIC16.55■□□□□ 0.24
PHOX2BQ99453 AP003400.6-201ENST00000624698 740 ntBASIC16.55■□□□□ 0.24
PHOX2BQ99453 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 FOXO1B-201ENST00000504678 1527 ntBASIC16.55■□□□□ 0.24
PHOX2BQ99453 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHOX2BQ99453 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
PHOX2BQ99453 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms