Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.05■□□□□ 0.8
NLRP3Q96P20 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NLRP3Q96P20 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.05■□□□□ 0.8
NLRP3Q96P20 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.05■□□□□ 0.8
NLRP3Q96P20 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.05■□□□□ 0.8
NLRP3Q96P20 AL512343.1-201ENST00000605837 169 ntBASIC20.05■□□□□ 0.8
NLRP3Q96P20 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NLRP3Q96P20 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NLRP3Q96P20 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NLRP3Q96P20 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.05■□□□□ 0.8
NLRP3Q96P20 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRP3Q96P20 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NLRP3Q96P20 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRP3Q96P20 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLRP3Q96P20 CLK3P2-201ENST00000427566 1453 ntBASIC20.05■□□□□ 0.8
NLRP3Q96P20 CDC14C-201ENST00000428251 1719 ntBASIC20.05■□□□□ 0.8
NLRP3Q96P20 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.05■□□□□ 0.8
NLRP3Q96P20 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 TMEM14DP-201ENST00000422205 345 ntBASIC20.04■□□□□ 0.8
NLRP3Q96P20 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLRP3Q96P20 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NLRP3Q96P20 AC005915.1-201ENST00000624912 2018 ntBASIC20.03■□□□□ 0.8
NLRP3Q96P20 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 Z97205.2-201ENST00000564697 1639 ntBASIC20.03■□□□□ 0.8
NLRP3Q96P20 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 AC105020.1-201ENST00000435356 2205 ntBASIC20.03■□□□□ 0.8
NLRP3Q96P20 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.03■□□□□ 0.8
NLRP3Q96P20 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLRP3Q96P20 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NLRP3Q96P20 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NLRP3Q96P20 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.02■□□□□ 0.8
NLRP3Q96P20 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.02■□□□□ 0.8
NLRP3Q96P20 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NLRP3Q96P20 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NLRP3Q96P20 AC092552.1-201ENST00000547243 906 ntBASIC20.02■□□□□ 0.8
NLRP3Q96P20 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NLRP3Q96P20 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLRP3Q96P20 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms