Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 FAM8A3P-201ENST00000427218 844 ntBASIC19.46■□□□□ 0.71
DDX11Q96FC9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 ADH5P3-201ENST00000433842 1137 ntBASIC19.46■□□□□ 0.71
DDX11Q96FC9 AC005237.2-201ENST00000434368 219 ntBASIC19.46■□□□□ 0.71
DDX11Q96FC9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 AC109322.1-201ENST00000524499 1264 ntBASIC19.46■□□□□ 0.71
DDX11Q96FC9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.46■□□□□ 0.71
DDX11Q96FC9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX11Q96FC9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX11Q96FC9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 AC087641.1-201ENST00000557561 1021 ntBASIC19.45■□□□□ 0.7
DDX11Q96FC9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 AC005412.3-201ENST00000580309 715 ntBASIC19.45■□□□□ 0.7
DDX11Q96FC9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 AC099522.2-201ENST00000607001 744 ntBASIC19.45■□□□□ 0.7
DDX11Q96FC9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.45■□□□□ 0.7
DDX11Q96FC9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX11Q96FC9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX11Q96FC9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX11Q96FC9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
DDX11Q96FC9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms