Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 AC012441.1-201ENST00000446669 685 ntBASIC16.13■□□□□ 0.17
CLDN23Q96B33 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 RPL13AP20-201ENST00000459725 609 ntBASIC16.13■□□□□ 0.17
CLDN23Q96B33 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 C2orf69P2-201ENST00000562032 1123 ntBASIC16.13■□□□□ 0.17
CLDN23Q96B33 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 CLUHP6-201ENST00000580789 941 ntBASIC16.13■□□□□ 0.17
CLDN23Q96B33 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 LINC01144-201ENST00000626198 1710 ntBASIC16.13■□□□□ 0.17
CLDN23Q96B33 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN23Q96B33 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN23Q96B33 AC006538.1-201ENST00000567905 1585 ntBASIC16.13■□□□□ 0.17
CLDN23Q96B33 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 AC026954.1-201ENST00000429771 1293 ntBASIC16.12■□□□□ 0.17
CLDN23Q96B33 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 AC006033.1-201ENST00000440505 426 ntBASIC16.12■□□□□ 0.17
CLDN23Q96B33 TARDBPP1-201ENST00000442013 1203 ntBASIC16.12■□□□□ 0.17
CLDN23Q96B33 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 RN7SL560P-201ENST00000577943 264 ntBASIC16.12■□□□□ 0.17
CLDN23Q96B33 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 RHOXF1P1-202ENST00000635473 501 ntBASIC16.12■□□□□ 0.17
CLDN23Q96B33 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN23Q96B33 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN23Q96B33 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN23Q96B33 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN23Q96B33 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms