Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 AP006288.1-201ENST00000446065 395 ntBASIC16.63■□□□□ 0.25
PTCD2Q8WV60 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 HMGB1P8-201ENST00000558211 949 ntBASIC16.63■□□□□ 0.25
PTCD2Q8WV60 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 AC099522.2-201ENST00000607001 744 ntBASIC16.63■□□□□ 0.25
PTCD2Q8WV60 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTCD2Q8WV60 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 ANKRD19P-201ENST00000338192 862 ntBASIC16.62■□□□□ 0.25
PTCD2Q8WV60 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 AC109635.5-201ENST00000533593 962 ntBASIC16.62■□□□□ 0.25
PTCD2Q8WV60 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 PCDH8P1-201ENST00000428983 2773 ntBASIC16.62■□□□□ 0.25
PTCD2Q8WV60 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PTCD2Q8WV60 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.61■□□□□ 0.25
PTCD2Q8WV60 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCD2Q8WV60 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms