Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 AC092364.2-201ENST00000596710 2692 ntBASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 HMGA1P7-201ENST00000406908 502 ntBASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 HCG4B-203ENST00000450128 991 ntBASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 PCDHA1-201ENST00000378133 2726 ntBASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF439Q8NDP4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 RNU1-129P-201ENST00000384064 167 ntBASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 CRYGEP-201ENST00000412192 528 ntBASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 U1.21-201ENST00000580816 167 ntBASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 AL645728.2-201ENST00000641974 660 ntBASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF439Q8NDP4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms