Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 AC012441.1-201ENST00000446669 685 ntBASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 MIR3907-201ENST00000579424 151 ntBASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 OR6D1P-203ENST00000641209 4860 ntBASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 AC114501.1-201ENST00000445949 172 ntBASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 MAGEA5-201ENST00000446757 942 ntBASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 HIST2H2BC-201ENST00000498492 580 ntBASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 AC020914.3-201ENST00000594712 304 ntBASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 AC108860.2-201ENST00000562760 2183 ntBASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 MSTO2P-201ENST00000314835 1709 ntBASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 RN7SL720P-201ENST00000488178 304 ntBASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC168Q8NDH2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AC093433.1-201ENST00000458048 571 ntBASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AL589702.1-201ENST00000641229 1509 ntBASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AC138028.4-201ENST00000564984 1845 ntBASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 MIR33B-201ENST00000385104 96 ntBASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms