Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 YBX2P1-201ENST00000394192 760 ntBASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 TFAMP1-201ENST00000412727 736 ntBASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 AL135744.1-201ENST00000565098 629 ntBASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35BQ8NCS4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35BQ8NCS4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
TMEM35BQ8NCS4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.33■□□□□ 0.37
TMEM35BQ8NCS4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.33■□□□□ 0.37
TMEM35BQ8NCS4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TMEM35BQ8NCS4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35BQ8NCS4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM35BQ8NCS4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TMEM35BQ8NCS4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 ACTG1P14-201ENST00000446382 1122 ntBASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM35BQ8NCS4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 AL589702.1-201ENST00000641229 1509 ntBASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 MIR648-201ENST00000385046 94 ntBASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 MKNK2P1-201ENST00000437526 628 ntBASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 RN7SL589P-201ENST00000481268 310 ntBASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM35BQ8NCS4 AC073389.1-201ENST00000595595 795 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms