Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC023310.3-201ENST00000557027 670 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 AC100756.1-201ENST00000562736 682 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 AC138749.3-201ENST00000567691 622 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 AC026979.3-201ENST00000607315 403 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 AC116165.1-201ENST00000611806 668 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 MIR6869-201ENST00000619434 62 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 LINC00895-201ENST00000629028 1637 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 AC020907.1-201ENST00000616460 1350 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 KLF2P4-201ENST00000451959 1225 ntBASIC12.79□□□□□ -0.36
C3orf56Q8N813 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 BTNL10-201ENST00000595971 695 ntBASIC12.79□□□□□ -0.36
C3orf56Q8N813 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.79□□□□□ -0.36
C3orf56Q8N813 MIR6069-201ENST00000620069 79 ntBASIC12.79□□□□□ -0.36
C3orf56Q8N813 AC004461.2-201ENST00000629517 803 ntBASIC12.79□□□□□ -0.36
C3orf56Q8N813 AL033527.5-202ENST00000641632 1098 ntBASIC12.79□□□□□ -0.36
C3orf56Q8N813 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 AC007326.2-201ENST00000624224 7579 ntBASIC12.79□□□□□ -0.36
C3orf56Q8N813 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C3orf56Q8N813 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.79□□□□□ -0.36
C3orf56Q8N813 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
C3orf56Q8N813 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms