Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 AC002056.1-201ENST00000395613 760 ntBASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 AL161645.1-201ENST00000622716 1255 ntBASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC116Q8IYX3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC116Q8IYX3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC116Q8IYX3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC116Q8IYX3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.46■□□□□ 0.06
CCDC116Q8IYX3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC116Q8IYX3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.46■□□□□ 0.06
CCDC116Q8IYX3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC116Q8IYX3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.46■□□□□ 0.06
CCDC116Q8IYX3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 AC112191.1-201ENST00000523689 701 ntBASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 AC040169.1-201ENST00000565382 521 ntBASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 AKR1B10P2-201ENST00000577332 927 ntBASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC116Q8IYX3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms