Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AL592424.1-201ENST00000563624 1536 ntBASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AC006449.6-201ENST00000612330 2296 ntBASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AL627223.1-201ENST00000416693 442 ntBASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AC142381.1-201ENST00000426099 345 ntBASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 RFPL4AP1-201ENST00000530883 850 ntBASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 AC092364.2-202ENST00000597012 1073 ntBASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCUBE3Q8IX30 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.21■□□□□ 0.34
SCUBE3Q8IX30 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 METTL21AP1-201ENST00000438852 635 ntBASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 AC098859.1-201ENST00000502915 1238 ntBASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SCUBE3Q8IX30 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCUBE3Q8IX30 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms