Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 LINC01225-203ENST00000563550 1244 ntBASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 AL136317.3-201ENST00000618497 906 ntBASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 SNX33P1-201ENST00000592116 1762 ntBASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 AC105020.1-201ENST00000435356 2205 ntBASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 AC067863.1-201ENST00000494933 530 ntBASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 AL138918.1-201ENST00000568306 659 ntBASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 AL355385.1-201ENST00000606123 409 ntBASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 AC068418.2-201ENST00000577309 3703 ntBASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TRIM48Q8IWZ4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 AL603756.1-201ENST00000606511 2163 ntBASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 AL596257.1-201ENST00000641463 2694 ntBASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 AC020765.3-201ENST00000613051 740 ntBASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 AP001059.3-201ENST00000619053 235 ntBASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 Z92544.3-201ENST00000624747 417 ntBASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM48Q8IWZ4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms