Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC60Q8IWA6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC60Q8IWA6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.11■□□□□ 0.49
CCDC60Q8IWA6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC60Q8IWA6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC60Q8IWA6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC60Q8IWA6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC60Q8IWA6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 SPDYE17-201ENST00000412399 783 ntBASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 AL139010.1-201ENST00000454878 894 ntBASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 SERBP1P5-201ENST00000510079 1181 ntBASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 AC008738.7-201ENST00000609744 511 ntBASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC60Q8IWA6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 TERF1P3-201ENST00000505638 1227 ntBASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 PKD1P1-201ENST00000458669 6805 ntBASIC18.09■□□□□ 0.49
CCDC60Q8IWA6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 KRT8P12-202ENST00000472924 1397 ntBASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC60Q8IWA6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 AC010336.2-201ENST00000564226 506 ntBASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC60Q8IWA6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms