Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.43□□□□□ -0.1
LYSMD2Q8IV50 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 KRT17P2-201ENST00000300992 1314 ntBASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 MIR648-201ENST00000385046 94 ntBASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 GPR32P1-201ENST00000601788 811 ntBASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 AC013467.2-201ENST00000605472 835 ntBASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 CICP20-201ENST00000443330 2801 ntBASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD2Q8IV50 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 KRT8P10-201ENST00000450021 1447 ntBASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 AC006277.1-201ENST00000624348 1610 ntBASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 MIR718-201ENST00000390190 70 ntBASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 AC008550.1-201ENST00000511500 884 ntBASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 STK25P1-201ENST00000585406 838 ntBASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 AC140113.3-201ENST00000605663 199 ntBASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 AL023973.1-201ENST00000624619 620 ntBASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 AL021920.2-201ENST00000624828 1351 ntBASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms