Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 AC007967.4-201ENST00000614700 386 ntBASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 AC093512.1-201ENST00000617969 520 ntBASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 AL592424.1-201ENST00000563624 1536 ntBASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 AC107890.1-201ENST00000422478 521 ntBASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 AC061975.2-201ENST00000581722 295 ntBASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM4Q86VH4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM4Q86VH4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms