Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 AP000842.3-202ENST00000569238 1080 ntBASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SH3RF1Q7Z6J0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 GPAA1P2-202ENST00000606848 1787 ntBASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 AC004233.3-201ENST00000607794 1269 ntBASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 AC022188.1-201ENST00000620960 1664 ntBASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SH3RF1Q7Z6J0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 MIR346-201ENST00000362234 95 ntBASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 HCG4-201ENST00000418983 998 ntBASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 AC027307.2-201ENST00000591252 911 ntBASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 AC073592.8-201ENST00000624126 511 ntBASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 AC012569.1-201ENST00000591191 1524 ntBASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SH3RF1Q7Z6J0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms