Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 AC069218.1-201ENST00000435269 762 ntBASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 NKAIN1P1-201ENST00000435754 582 ntBASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.22■□□□□ 0.83
RGPD4Q7Z3J3 AC135050.7-201ENST00000624508 2218 ntBASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 CD8B2-202ENST00000417670 633 ntBASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 RNA5SP486-201ENST00000515961 83 ntBASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 MIR6756-201ENST00000616240 63 ntBASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.21■□□□□ 0.83
RGPD4Q7Z3J3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 AL133466.1-201ENST00000447582 150 ntBASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 AL133499.1-201ENST00000596207 608 ntBASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms