Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 KRT8P12-202ENST00000472924 1397 ntBASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 ZNF890P-202ENST00000530367 1156 ntBASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DCLRE1AQ6PJP8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 PIN1P1-201ENST00000412108 996 ntBASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 AC007274.1-201ENST00000439805 662 ntBASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 MIR4321-201ENST00000592276 80 ntBASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 AC008738.7-201ENST00000609744 511 ntBASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DCLRE1AQ6PJP8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DCLRE1AQ6PJP8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms