Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTR9Q6PD62 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTR9Q6PD62 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTR9Q6PD62 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTR9Q6PD62 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTR9Q6PD62 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTR9Q6PD62 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 SPCS2P1-201ENST00000561636 679 ntBASIC19.4■□□□□ 0.7
CTR9Q6PD62 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 AL158211.3-201ENST00000607385 239 ntBASIC19.4■□□□□ 0.7
CTR9Q6PD62 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTR9Q6PD62 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.4■□□□□ 0.7
CTR9Q6PD62 CROCCP1-201ENST00000426910 5675 ntBASIC19.4■□□□□ 0.7
CTR9Q6PD62 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTR9Q6PD62 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTR9Q6PD62 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.39■□□□□ 0.7
CTR9Q6PD62 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.39■□□□□ 0.7
CTR9Q6PD62 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTR9Q6PD62 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTR9Q6PD62 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTR9Q6PD62 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CTR9Q6PD62 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTR9Q6PD62 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.39■□□□□ 0.69
CTR9Q6PD62 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTR9Q6PD62 AL596257.1-201ENST00000641463 2694 ntBASIC19.38■□□□□ 0.69
CTR9Q6PD62 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 ME2P1-201ENST00000426028 1970 ntBASIC19.38■□□□□ 0.69
CTR9Q6PD62 AL353705.2-201ENST00000428243 662 ntBASIC19.38■□□□□ 0.69
CTR9Q6PD62 BCRP1-201ENST00000444246 691 ntBASIC19.38■□□□□ 0.69
CTR9Q6PD62 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 AC093214.1-201ENST00000511688 1107 ntBASIC19.38■□□□□ 0.69
CTR9Q6PD62 AC105021.1-202ENST00000570572 669 ntBASIC19.38■□□□□ 0.69
CTR9Q6PD62 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms