Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FAM86LP-201ENST00000478302 853 ntBASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 RNA5SP412-201ENST00000516234 123 ntBASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 AC084346.2-201ENST00000607097 949 ntBASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PP12613-201ENST00000424958 2230 ntBASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 NEFHP1-201ENST00000412845 2629 ntBASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 NOC2LP2-201ENST00000407594 1944 ntBASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNKSR3Q6P9H4 KRT8P44-201ENST00000441609 1350 ntBASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 AL691432.1-201ENST00000596308 1422 ntBASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 AZGP1P1-201ENST00000411909 902 ntBASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 AL359711.2-201ENST00000563105 872 ntBASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNKSR3Q6P9H4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CNKSR3Q6P9H4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.39■□□□□ 0.38
CNKSR3Q6P9H4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 GGT3P-204ENST00000453783 1664 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 AC005229.1-201ENST00000392885 409 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 BRWD1P1-201ENST00000401091 371 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 CSF2RBP1-201ENST00000447905 391 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 FO681548.1-201ENST00000455617 1132 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 ENPP7P5-201ENST00000541031 1031 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 PTP4A1P2-201ENST00000546033 454 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 AC243562.2-201ENST00000561247 970 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 GPR182-203ENST00000622922 591 ntBASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNKSR3Q6P9H4 KRT8P37-201ENST00000451609 1420 ntBASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms