Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 AC005915.1-201ENST00000624912 2018 ntBASIC18.33■□□□□ 0.53
CCDC62Q6P9F0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC62Q6P9F0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC62Q6P9F0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC62Q6P9F0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC62Q6P9F0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC62Q6P9F0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC62Q6P9F0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC62Q6P9F0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 AC135586.1-201ENST00000539323 574 ntBASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 AC004790.1-201ENST00000612686 536 ntBASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC62Q6P9F0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 COX5BP8-201ENST00000416911 349 ntBASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 RN7SL618P-201ENST00000477850 296 ntBASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 TP53TG3HP-202ENST00000569755 579 ntBASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 PCGF3-213ENST00000620529 1899 ntBASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC62Q6P9F0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 RN7SL692P-201ENST00000464677 288 ntBASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 AC044860.1-202ENST00000559481 777 ntBASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 AC026979.3-201ENST00000607315 403 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms