Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 FDX1P1-201ENST00000449115 551 ntBASIC16.97■□□□□ 0.31
LRRC38Q5VT99 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 AC132872.4-202ENST00000622924 2756 ntBASIC16.97■□□□□ 0.31
LRRC38Q5VT99 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LRRC38Q5VT99 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 PMS2P7-201ENST00000506558 1336 ntBASIC16.96■□□□□ 0.31
LRRC38Q5VT99 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 AC007967.2-201ENST00000432613 625 ntBASIC16.96■□□□□ 0.31
LRRC38Q5VT99 AL591424.1-201ENST00000442569 1213 ntBASIC16.96■□□□□ 0.31
LRRC38Q5VT99 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 AC073389.1-201ENST00000595595 795 ntBASIC16.96■□□□□ 0.31
LRRC38Q5VT99 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LRRC38Q5VT99 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC38Q5VT99 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC38Q5VT99 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC38Q5VT99 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC38Q5VT99 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC38Q5VT99 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC38Q5VT99 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC38Q5VT99 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC38Q5VT99 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 AL139384.1-201ENST00000612143 3047 ntBASIC16.95■□□□□ 0.3
LRRC38Q5VT99 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 ZNF259P1-201ENST00000407656 1365 ntBASIC16.95■□□□□ 0.3
LRRC38Q5VT99 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 AC112191.1-201ENST00000523689 701 ntBASIC16.95■□□□□ 0.3
LRRC38Q5VT99 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 BX640515.1-201ENST00000617215 977 ntBASIC16.95■□□□□ 0.3
LRRC38Q5VT99 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC38Q5VT99 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms