Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.27■□□□□ 0.36
VARS2Q5ST30 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.27■□□□□ 0.36
VARS2Q5ST30 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 SPDYE17-201ENST00000412399 783 ntBASIC17.27■□□□□ 0.36
VARS2Q5ST30 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.27■□□□□ 0.36
VARS2Q5ST30 AL139010.1-201ENST00000454878 894 ntBASIC17.27■□□□□ 0.36
VARS2Q5ST30 ZNF890P-202ENST00000530367 1156 ntBASIC17.27■□□□□ 0.36
VARS2Q5ST30 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.27■□□□□ 0.36
VARS2Q5ST30 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.27■□□□□ 0.36
VARS2Q5ST30 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.27■□□□□ 0.36
VARS2Q5ST30 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARS2Q5ST30 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
VARS2Q5ST30 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.27■□□□□ 0.35
VARS2Q5ST30 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
VARS2Q5ST30 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.27■□□□□ 0.35
VARS2Q5ST30 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
VARS2Q5ST30 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
VARS2Q5ST30 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.27■□□□□ 0.35
VARS2Q5ST30 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VARS2Q5ST30 AC009053.2-201ENST00000563701 2365 ntBASIC17.26■□□□□ 0.35
VARS2Q5ST30 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 SERBP1P3-201ENST00000459980 809 ntBASIC17.26■□□□□ 0.35
VARS2Q5ST30 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 SPDYE22P-201ENST00000582158 798 ntBASIC17.26■□□□□ 0.35
VARS2Q5ST30 AL365330.1-201ENST00000607459 531 ntBASIC17.26■□□□□ 0.35
VARS2Q5ST30 AL662799.1-202ENST00000614205 422 ntBASIC17.26■□□□□ 0.35
VARS2Q5ST30 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARS2Q5ST30 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VARS2Q5ST30 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 AC080080.1-201ENST00000625121 2420 ntBASIC17.25■□□□□ 0.35
VARS2Q5ST30 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 AC135586.1-201ENST00000539323 574 ntBASIC17.25■□□□□ 0.35
VARS2Q5ST30 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 MIR4321-201ENST00000592276 80 ntBASIC17.25■□□□□ 0.35
VARS2Q5ST30 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms