Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 PCDHB18P-201ENST00000524813 2368 ntBASIC20.05■□□□□ 0.8
DDR1Q08345 AL691432.1-201ENST00000596308 1422 ntBASIC20.05■□□□□ 0.8
DDR1Q08345 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.05■□□□□ 0.8
DDR1Q08345 AC106760.1-201ENST00000508690 800 ntBASIC20.05■□□□□ 0.8
DDR1Q08345 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.05■□□□□ 0.8
DDR1Q08345 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.05■□□□□ 0.8
DDR1Q08345 ENPP7P5-201ENST00000541031 1031 ntBASIC20.05■□□□□ 0.8
DDR1Q08345 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.05■□□□□ 0.8
DDR1Q08345 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.05■□□□□ 0.8
DDR1Q08345 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.05■□□□□ 0.8
DDR1Q08345 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
DDR1Q08345 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.05■□□□□ 0.8
DDR1Q08345 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.05■□□□□ 0.8
DDR1Q08345 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDR1Q08345 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.04■□□□□ 0.8
DDR1Q08345 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.04■□□□□ 0.8
DDR1Q08345 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 AC006538.1-201ENST00000567905 1585 ntBASIC20.04■□□□□ 0.8
DDR1Q08345 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.04■□□□□ 0.8
DDR1Q08345 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 PFN1P12-201ENST00000455938 534 ntBASIC20.04■□□□□ 0.8
DDR1Q08345 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.04■□□□□ 0.8
DDR1Q08345 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
DDR1Q08345 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.04■□□□□ 0.8
DDR1Q08345 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.04■□□□□ 0.8
DDR1Q08345 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.04■□□□□ 0.8
DDR1Q08345 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
DDR1Q08345 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DDR1Q08345 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
DDR1Q08345 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
DDR1Q08345 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDR1Q08345 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DDR1Q08345 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.03■□□□□ 0.8
DDR1Q08345 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.03■□□□□ 0.8
DDR1Q08345 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.03■□□□□ 0.8
DDR1Q08345 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.03■□□□□ 0.8
DDR1Q08345 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.03■□□□□ 0.8
DDR1Q08345 AC134915.1-201ENST00000426461 574 ntBASIC20.03■□□□□ 0.8
DDR1Q08345 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.03■□□□□ 0.8
DDR1Q08345 AL355864.2-201ENST00000447420 863 ntBASIC20.03■□□□□ 0.8
DDR1Q08345 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.03■□□□□ 0.8
DDR1Q08345 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.03■□□□□ 0.8
DDR1Q08345 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.03■□□□□ 0.8
DDR1Q08345 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.03■□□□□ 0.8
DDR1Q08345 AC010328.2-201ENST00000597698 1111 ntBASIC20.03■□□□□ 0.8
DDR1Q08345 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
DDR1Q08345 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.03■□□□□ 0.8
DDR1Q08345 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.03■□□□□ 0.8
DDR1Q08345 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.03■□□□□ 0.8
DDR1Q08345 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDR1Q08345 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DDR1Q08345 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.02■□□□□ 0.8
DDR1Q08345 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
DDR1Q08345 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.02■□□□□ 0.8
DDR1Q08345 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.02■□□□□ 0.8
DDR1Q08345 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.02■□□□□ 0.8
DDR1Q08345 YBX1P6-201ENST00000442962 1002 ntBASIC20.02■□□□□ 0.8
DDR1Q08345 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms