Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX3P78415 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.06■□□□□ 0.64
IRX3P78415 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.06■□□□□ 0.64
IRX3P78415 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
IRX3P78415 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
IRX3P78415 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
IRX3P78415 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 AL080243.2-201ENST00000418783 582 ntBASIC19.05■□□□□ 0.64
IRX3P78415 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.05■□□□□ 0.64
IRX3P78415 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.05■□□□□ 0.64
IRX3P78415 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.05■□□□□ 0.64
IRX3P78415 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.05■□□□□ 0.64
IRX3P78415 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.05■□□□□ 0.64
IRX3P78415 AL133215.2-201ENST00000609242 977 ntBASIC19.05■□□□□ 0.64
IRX3P78415 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.05■□□□□ 0.64
IRX3P78415 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 KRT8P39-201ENST00000396270 1433 ntBASIC19.05■□□□□ 0.64
IRX3P78415 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.05■□□□□ 0.64
IRX3P78415 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.05■□□□□ 0.64
IRX3P78415 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
IRX3P78415 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
IRX3P78415 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX3P78415 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.04■□□□□ 0.64
IRX3P78415 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
IRX3P78415 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
IRX3P78415 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.04■□□□□ 0.64
IRX3P78415 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.04■□□□□ 0.64
IRX3P78415 API5-211ENST00000534695 560 ntTSL 5 BASIC19.04■□□□□ 0.64
IRX3P78415 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.04■□□□□ 0.64
IRX3P78415 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.04■□□□□ 0.64
IRX3P78415 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.04■□□□□ 0.64
IRX3P78415 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
IRX3P78415 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.04■□□□□ 0.64
IRX3P78415 AC092053.1-201ENST00000605787 1936 ntBASIC19.04■□□□□ 0.64
IRX3P78415 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX3P78415 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.03■□□□□ 0.64
IRX3P78415 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 AC138969.3-201ENST00000546612 1459 ntBASIC19.03■□□□□ 0.64
IRX3P78415 AC138932.2-201ENST00000548268 1459 ntBASIC19.03■□□□□ 0.64
IRX3P78415 AC126755.4-201ENST00000549796 1459 ntBASIC19.03■□□□□ 0.64
IRX3P78415 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.03■□□□□ 0.64
IRX3P78415 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.03■□□□□ 0.64
IRX3P78415 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.03■□□□□ 0.64
IRX3P78415 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.03■□□□□ 0.64
IRX3P78415 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
IRX3P78415 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
IRX3P78415 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.03■□□□□ 0.64
IRX3P78415 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.03■□□□□ 0.64
IRX3P78415 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.03■□□□□ 0.64
IRX3P78415 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.03■□□□□ 0.64
IRX3P78415 RN7SL618P-201ENST00000477850 296 ntBASIC19.03■□□□□ 0.64
IRX3P78415 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
IRX3P78415 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.03■□□□□ 0.64
IRX3P78415 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.03■□□□□ 0.64
IRX3P78415 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms