Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC211476.1-201ENST00000503899 468 ntBASIC17.52■□□□□ 0.4
RAD23BP54727 PRYP6-201ENST00000514804 343 ntBASIC17.52■□□□□ 0.4
RAD23BP54727 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD23BP54727 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RAD23BP54727 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RAD23BP54727 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
RAD23BP54727 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.52■□□□□ 0.4
RAD23BP54727 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.52■□□□□ 0.4
RAD23BP54727 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.52■□□□□ 0.4
RAD23BP54727 AC022145.2-201ENST00000598203 171 ntBASIC17.52■□□□□ 0.4
RAD23BP54727 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.52■□□□□ 0.4
RAD23BP54727 AL513210.1-201ENST00000629608 234 ntBASIC17.52■□□□□ 0.4
RAD23BP54727 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.52■□□□□ 0.4
RAD23BP54727 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
RAD23BP54727 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAD23BP54727 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD23BP54727 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD23BP54727 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAD23BP54727 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAD23BP54727 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAD23BP54727 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAD23BP54727 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAD23BP54727 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RAD23BP54727 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RAD23BP54727 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.52■□□□□ 0.39
RAD23BP54727 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAD23BP54727 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAD23BP54727 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAD23BP54727 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RAD23BP54727 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 AC006449.5-201ENST00000610658 2098 ntBASIC17.51■□□□□ 0.39
RAD23BP54727 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RAD23BP54727 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.51■□□□□ 0.39
RAD23BP54727 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.51■□□□□ 0.39
RAD23BP54727 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.51■□□□□ 0.39
RAD23BP54727 AC027307.2-201ENST00000591252 911 ntBASIC17.51■□□□□ 0.39
RAD23BP54727 AC073389.1-201ENST00000595595 795 ntBASIC17.51■□□□□ 0.39
RAD23BP54727 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.51■□□□□ 0.39
RAD23BP54727 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RAD23BP54727 AC008267.7-201ENST00000624570 1194 ntBASIC17.51■□□□□ 0.39
RAD23BP54727 AC134684.3-201ENST00000641758 218 ntBASIC17.51■□□□□ 0.39
RAD23BP54727 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.51■□□□□ 0.39
RAD23BP54727 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.51■□□□□ 0.39
RAD23BP54727 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAD23BP54727 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.51■□□□□ 0.39
RAD23BP54727 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD23BP54727 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RAD23BP54727 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RAD23BP54727 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAD23BP54727 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RAD23BP54727 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 MIR1233-2-201ENST00000408138 82 ntBASIC17.5■□□□□ 0.39
RAD23BP54727 MIR1233-1-201ENST00000408722 82 ntBASIC17.5■□□□□ 0.39
RAD23BP54727 AC004461.1-201ENST00000412461 403 ntBASIC17.5■□□□□ 0.39
RAD23BP54727 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.5■□□□□ 0.39
RAD23BP54727 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms